Bacillus anthracis

Bacillus cereus

Bordetella pertussis

Borrelia burgdorferi

Brucella genus

Campylobacter genus

F3Carbapenemase-producing Gram-negative organisms (excluding those with intrinsic carbapenem resistance from any human specimen)

Chlamydia psittaci

Clostridium botulinum

Clostridium difficile

Clostridium perfringens

Clostridium tetani

Corynebacterium diphtheriae (toxigenic strains)

Corynebacterium ulcerans

Coxiella burnetii

Crimean-Congo haemorrhagic fever virus

Cryptosporidium

Dengue virus

Ebola virus

Echinococcus genus

Verocytotoxin-producing E.coli (VTEC)

Francisella tularensis

Giardia lamblia

Guanarito virus

Haemophilus influenzae type b (from blood, cerebrospinal fluid or other normally sterile site)

Hantavirus

Hepatitis A virus

Hepatitis B virus

Hepatitis C virus

Hepatitis E virus

Influenza virus (all types, including those caused by a new sub-type)

Junín virus

Kyasanur Forest disease virus

Lassa virus

Legionella genus

Leptospira genus

Listeria monocytogenes

Machupo virus

Marburg virus

Measles virus

F2Monkeypox virus

Mumps virus

Mycobacterium bovis

Mycobacterium tuberculosis complex

Neisseria meningitidis

Norovirus

Omsk haemorrhagic fever virus

Plasmodium falciparum, vivax, ovale and malariae

Polio virus

Rabies virus

Rickettsia prowazekii

Rift Valley fever virus

Rubella virus

Sabia virus

Salmonella (all human types)

SARS-associated coronavirus

F1Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)

Shigella genus

Enterotoxigenic Staphylococcus aureus

Staphylococcus aureus (all blood isolates)

Methicillin-resistant Staphylococcus aureus (MRSA)

Streptococcus pyogenes (from blood, cerebrospinal fluid or other normally sterile site)

Streptococcus pneumoniae (from blood, cerebrospinal fluid or other normally sterile site)

Toxoplasma gondii

Trichinella genus

Varicella-zoster virus

Variola virus

Vibrio cholerae

West Nile fever virus

Yellow Fever virus

Yersinia enterocolitica

Yersinia pestis

Yersinia pseudotuberculosis